Protein Alignment slou and cdx1a

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 66
• Identity: 27/66 - (40%)
• Similarity: 44/66 - (66%)
• Gaps: 1/66 - (1%)

  Fly   540 GGGSKPR-RARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 603
            ||.::.: :.|..::..|.:.||.:|..:||:::..:..||.:|:|:|.||||||||||.|.:|.
Zfish   123 GGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAKERKM 187

  Fly   604 N 604
            |
Zfish   188 N 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	23/56 (41%)
cdx1a	NP_998001.2	Caudal_act	11..123	CDD:461413	27/66 (41%)
		Homeodomain	131..186	CDD:459649	23/54 (43%)