Protein Alignment slou and nkx1.2la

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_997995.2
• Gene: nkx1.2la / 405755
• ZFINID: ZDB-GENE-040615-1
• Length: 270
• Species: Danio rerio
• Alignment Length: 279
• Identity: 105/279 - (37%)
• Similarity: 124/279 - (44%)
• Gaps: 93/279 - (33%)

  Fly   435 SSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSA--Q 497
            |..:..:..|::||:.:||||.|||..|               .|...:||....::....:  :
Zfish     7 SGGKGTSDHRISFSIIDILDPTKFTSKK---------------TDVSEKERTSSSENTGFGSLEE 56

  Fly   498 DLNDMDQDDMC-------------------DDGSDIDDPSSETDSKKGGS--------------- 528
            ..|....|..|                   |...|.|..||....|.|.|
Zfish    57 SRNGKHSDGECESTGDRSDDRHGCVRLHPPDPDVDFDCSSSHRSLKSGFSPCEDPDEAAEERMTP 121

  Fly   529 ----------RNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLS 583
                      |..|...       :|||||||||||||||:|||||:.|||||||||||||||||
Zfish   122 APDDVSRQRRRRSDHSC-------AKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLS 179

  Fly   584 LTETQVKIWFQNRRTKWKKQNPGMD------VNS-PTIPPPGGGSFGPGAYASGLLYSHAVPYPP 641
            |||||||||||||||||||||||::      .|| |.|.|..|.       ||.|       :||
Zfish   180 LTETQVKIWFQNRRTKWKKQNPGVESSLQAGTNSLPNISPSCGS-------ASAL-------HPP 230

  Fly   642 YGP---YFHPLGAHHLSHS 657
            :..   .||. |..||:.|
Zfish   231 FSTGNMIFHS-GPVHLASS 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	52/55 (95%)
nkx1.2la	NP_997995.2	Homeodomain	142..198	CDD:459649	52/55 (95%)