Protein Alignment slou and cdx4

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_989417.1
• Gene: cdx4 / 395056
• XenbaseID: XB-GENE-482787
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 183
• Identity: 49/183 - (26%)
• Similarity: 75/183 - (40%)
• Gaps: 47/183 - (25%)

  Fly   421 SSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLP-SGPFGHPRQWSYERDEEMQE 484
            :|..|.||:.:.:.|||               |.||:|..|... |.|  ||.........::..
 Frog    73 NSYGAGPSNTNMAQSSD---------------LSPNQFAYNSSGYSSP--HPSGTGILHSVDLSH 120

  Fly   485 RLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRAR 549
                     .:|...:|:.|:.....|..:...|:      |.:|..:              :.|
 Frog   121 ---------TAANSPSDLSQNSYEWMGKTVQSTST------GKTRTKE--------------KYR 156

  Fly   550 TAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 602
            ..:|..|.:.||.:|..:||:::..:..||.||.|:|.||||||||||.|.:|
 Frog   157 VVYTDHQRLELEKEFHYSRYITIRRKTELAASLRLSERQVKIWFQNRRAKERK 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	25/55 (45%)
cdx4	NP_989417.1	Caudal_act	16..147	CDD:461413	21/105 (20%)
		Homeodomain	154..209	CDD:459649	25/54 (46%)