DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and exex

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:560 Identity:144/560 - (25%)
Similarity:194/560 - (34%) Gaps:169/560 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 NHNNNNSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAVRHLARPEP--LQHPHAAL 181
            :|..::|.:.|:..|:.|  .||||.    .:...:.|..|    :.|....|.|  ....|:|.
  Fly    30 SHIQHHSSSLHHQRSHQR--SSPPAQ----DYDQGSNQSTL----SPRSQITPSPPAASPTHSAA 84

  Fly   182 LQQHPHLLQNPQFL-AAAQQHMHHHQHQHHQHP----------AHPHSHQHPHPHPH-------- 227
            ....|.....|... ..||........|..|.|          ..||||. |.|||.        
  Fly    85 TTGSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHP-PPPHPRLYVEGFPP 148

  Fly   228 PH--PHPHPS-AVFHL-RAPSSSSTAPPS-PATSPLSPPTSP---AMHSDQQMSPPIAPPQNPPH 284
            ||  |||||: ..:.| |.|......||. |:.:...||.||   |.|.....:........||.
  Fly   149 PHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLPPA 213

  Fly   285 SSQPPQ-----------QQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISI 338
            .|||.:           |.|...|..:.::. :|.|...|| .||....|..:|||:.:.|.   
  Fly   214 QSQPKKSFCIDALLAKSQHQSGEPQPIIVDD-RLAALHYAR-DQAELNHAFVTASNAAAAAQ--- 273

  Fly   339 SNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDG-NDEDSND 402
                                      |||:||...|.|.|......|...:..:.|| :..:|..
  Fly   274 --------------------------AAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPT 312

  Fly   403 GSH-STPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRL--------------------- 445
            .|| |:|.:.| ..........|.:|...|...|...|...|.:                     
  Fly   313 SSHRSSPPISP-GCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQ 376

  Fly   446 -------AFSVENILDPNKFTGNKLPSGPFGH---PRQWSYE---RDEEMQERLDDDQSEDMSAQ 497
                   ||  ...|||   :|..:|. |.||   |.|..:|   |...:..|:     .:::|.
  Fly   377 LLAQGGSAF--HRPLDP---SGKPIPI-PMGHNFMPSQLQFEFLARAGMLHHRI-----PELAAY 430

  Fly   498 DLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLEN 562
            ..:.:                                       ..|.||.|||||.:||:.||.
  Fly   431 PHHAI---------------------------------------LGKTRRPRTAFTSQQLLELEK 456

  Fly   563 KFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 602
            :||..:|||..:|..:|..|.|:||||||||||||.|||:
  Fly   457 QFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 34/55 (62%)
exexNP_648164.1 Homeodomain 440..496 CDD:459649 34/55 (62%)

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