DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and exex

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:560 Identity:144/560 - (25%)
Similarity:194/560 - (34%) Gaps:169/560 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 NHNNNNSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAVRHLARPEP--LQHPHAAL 181
            :|..::|.:.|:..|:.|  .||||.    .:...:.|..|    :.|....|.|  ....|:|.
  Fly    30 SHIQHHSSSLHHQRSHQR--SSPPAQ----DYDQGSNQSTL----SPRSQITPSPPAASPTHSAA 84

  Fly   182 LQQHPHLLQNPQFL-AAAQQHMHHHQHQHHQHP----------AHPHSHQHPHPHPH-------- 227
            ....|.....|... ..||........|..|.|          ..||||. |.|||.        
  Fly    85 TTGSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHP-PPPHPRLYVEGFPP 148

  Fly   228 PH--PHPHPS-AVFHL-RAPSSSSTAPPS-PATSPLSPPTSP---AMHSDQQMSPPIAPPQNPPH 284
            ||  |||||: ..:.| |.|......||. |:.:...||.||   |.|.....:........||.
  Fly   149 PHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLPPA 213

  Fly   285 SSQPPQ-----------QQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISI 338
            .|||.:           |.|...|..:.::. :|.|...|| .||....|..:|||:.:.|.   
  Fly   214 QSQPKKSFCIDALLAKSQHQSGEPQPIIVDD-RLAALHYAR-DQAELNHAFVTASNAAAAAQ--- 273

  Fly   339 SNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDG-NDEDSND 402
                                      |||:||...|.|.|......|...:..:.|| :..:|..
  Fly   274 --------------------------AAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPT 312

  Fly   403 GSH-STPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRL--------------------- 445
            .|| |:|.:.| ..........|.:|...|...|...|...|.:                     
  Fly   313 SSHRSSPPISP-GCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQ 376

  Fly   446 -------AFSVENILDPNKFTGNKLPSGPFGH---PRQWSYE---RDEEMQERLDDDQSEDMSAQ 497
                   ||  ...|||   :|..:|. |.||   |.|..:|   |...:..|:     .:::|.
  Fly   377 LLAQGGSAF--HRPLDP---SGKPIPI-PMGHNFMPSQLQFEFLARAGMLHHRI-----PELAAY 430

  Fly   498 DLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLEN 562
            ..:.:                                       ..|.||.|||||.:||:.||.
  Fly   431 PHHAI---------------------------------------LGKTRRPRTAFTSQQLLELEK 456

  Fly   563 KFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 602
            :||..:|||..:|..:|..|.|:||||||||||||.|||:
  Fly   457 QFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 31/51 (61%)
exexNP_648164.1 Homeobox 442..495 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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