DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and emx1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_937787.1 Gene:emx1 / 378964 ZFINID:ZDB-GENE-031007-7 Length:231 Species:Danio rerio


Alignment Length:205 Identity:57/205 - (27%)
Similarity:88/205 - (42%) Gaps:47/205 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 PVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILD------PNKFTGNKLPSGPFGH 470
            |:.|...:..:|.:..:.|.:..:..:..|.:.|..:.|.:..      |.....::|.|.|..|
Zfish    21 PITLEDPIRPTALSYSAPADSFLNGYQSPAGRALYPNPELVFSETVNHAPLSMHPHQLGSAPLQH 85

  Fly   471 PRQWSYERDEE-------MQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGS 528
            |..:..:..|.       ::.|....:.:.      ||:.||.:...|     |.:.        
Zfish    86 PHFFGTQHREPLNFYPWVLRNRFFGHRFQG------NDVSQDTLLLHG-----PFAR-------- 131

  Fly   529 RNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWF 593
                           ||:|.||||:..||:.||..|:...|:...||..||.||||:|||||:||
Zfish   132 ---------------KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQVKVWF 181

  Fly   594 QNRRTKWKKQ 603
            ||||||:|:|
Zfish   182 QNRRTKYKRQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 32/55 (58%)
emx1NP_937787.1 Homeodomain 134..190 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231
Blue background indicates that the domain is not in the aligned region.

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