Protein Alignment slou and lms

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 236
• Identity: 75/236 - (31%)
• Similarity: 98/236 - (41%)
• Gaps: 78/236 - (33%)

  Fly   470 HPRQWSYER---DEEMQERLD-DDQSEDMSAQDLNDMDQ------------DDMCDDG-SDIDDP 517
            :|..:|.|:   ..||:.... :|..:|.|.:..|.:..            ||..||| ||||..
  Fly    10 YPHSFSIEQILAKPEMRSSTSFEDSVQDESGRGGNCLGASRASSPATSSCLDDNMDDGKSDIDLA 74

  Fly   518 SSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSL 582
            |.:                |.|.|..:.:|.||||:..|:.:||.:|:..:||||.:|..||..|
  Fly    75 SDD----------------GNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQL 123

  Fly   583 SLTETQVKIWFQNRRTKWKKQNPGMDV------------------------------NSPTIPPP 617
            .|||||:||||||||||||::... ||                              .:||.|.|
  Fly   124 QLTETQIKIWFQNRRTKWKRKYTS-DVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTP 187

  Fly   618 -------GGGSFGPGAYASGLLYSHAVPY------PPY-GP 644
                   |.||..|.|.|:....|...||      ||. ||
  Fly   188 IQSIMLNGSGSAAPMASATTATGSPMRPYATSGGMPPLPGP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	33/55 (60%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	25/88 (28%)
		Homeodomain	87..143	CDD:459649	33/55 (60%)