DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Meox1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_063125617.1 Gene:Meox1 / 363684 RGDID:1308911 Length:328 Species:Rattus norvegicus


Alignment Length:248 Identity:51/248 - (20%)
Similarity:85/248 - (34%) Gaps:61/248 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 PPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAAR 314
            ||:|....|..|     ||:...:..:      ||  .||........||.        .|.||.
  Rat    14 PPAPVWGCLRNP-----HSEGSSASGL------PH--YPPTPFSFHQKSDF--------PATAAY 57

  Fly   315 TTQASSTSALASASNSVSNASISISNSSSGSPSGRD----LSDYGFRIQLGGLAAAAAAAAATSR 375
            ..  .|||.||:..:|:..|....:......|...|    :|:.|.|:.||        .|.::|
  Rat    58 PD--FSTSCLAATPHSLPRAERIFNEQHPAFPQTPDWHFPISEAGQRLNLG--------PAGSAR 112

  Fly   376 QIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDA 440
            ::.|.:....|.:..|..|                |.|       ....|:.:....|... ::.
  Rat   113 EMGAGSPGLVDGTGGLGED----------------CMV-------LGTIAHETEKKLSRRK-KER 153

  Fly   441 ATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSED 493
            :.:.:....||.::..:....::|:|  ..||.|......|.:.|...||:::
  Rat   154 SGQSVVPEPENEVEACEGGSARVPTG--AGPRGWRLCSFSEFRVRCSKDQNQE 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649
Meox1XP_063125617.1 None
Blue background indicates that the domain is not in the aligned region.

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