DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and inv

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:644 Identity:142/644 - (22%)
Similarity:203/644 - (31%) Gaps:232/644 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QSPAQKASDSASA---QNTAVGGLMSPNSNPDSPKSNTSPDVASADSVVSGTGGGSTPPAAKIPK 66
            ||.|.:|:.||.|   |...:..:..|                   |..|.|.....||:...| 
  Fly   108 QSEAAQAALSAQAQARQRLLISQIYRP-------------------SAFSSTATTVLPPSEGPP- 152

  Fly    67 FIISANGAAVAGKQEQELRYSLERLKQMSSESGSL---LSRLSPLQEDSQDKEKPN---HNNNNS 125
                               :|.|.|.|:...:|:.   ..|.|.|..:...|::.:   ....|:
  Fly   153 -------------------FSPEDLLQLPPSTGTFQEEFLRKSQLYAEELMKQQMHLMAAARVNA 198

  Fly   126 LTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAVRHLARPEPLQHPHAALLQQHPHLLQ 190
            ||...|....:.:.: .|:|.:|    |:.|..|.:|.|......|....|||..||.|      
  Fly   199 LTAAAAGKQLQMAMA-AAAVATV----PSGQDALAQLTATALGLGPGGAVHPHQQLLLQ------ 252

  Fly   191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPAT 255
                    :..:|||.|..:          |.:.:.:.|......::.::......|..|...|.
  Fly   253 --------RDQVHHHHHMQN----------HLNNNENLHERALKFSIDNILKADFGSRLPKIGAL 299

  Fly   256 SPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASS 320
            |                                                    ..:...:...||
  Fly   300 S----------------------------------------------------GNIGGGSVSGSS 312

  Fly   321 TSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARS 385
            |.:..::.|:..|.|...:...||.|                |..|.:.|||.|        :.|
  Fly   313 TGSSKNSGNTNGNRSPLKAPKKSGKP----------------LNLAQSNAAANS--------SLS 353

  Fly   386 DTSEELNVDGNDEDSN----DGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLA 446
            .:|...|:..|..|||    ..|.:..|..||||.:|...:|.|..:.|  |..|..|:.|    
  Fly   354 FSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGA--SGKSGEDSGT---- 412

  Fly   447 FSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDG 511
                                |...| .|.|      ..|..|..|...|                
  Fly   413 --------------------PIVWP-AWVY------CTRYSDRPSSGRS---------------- 434

  Fly   512 SDIDDPSSETDSKKGGSRNGDGKSGGG--------GGGGSKPRRARTAFTYEQLVSLENKFKTTR 568
                 |.:....|...|.:..|..|||        |||..:.:|.||||:..||..|:::|...|
  Fly   435 -----PRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENR 494

  Fly   569 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK----QNP--------GMDVNSPTIP 615
            ||:...|..|:..|.|.|.|:||||||:|.|.||    :||        |: .|..|||
  Fly   495 YLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGL-YNHSTIP 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 26/55 (47%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 26/55 (47%)
Engrail_1_C_sig 529..554 CDD:431338 7/25 (28%)

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