Protein Alignment slou and Hmx1

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001101833.2
• Gene: Hmx1 / 360960
• RGDID: 1304928
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 86/317 - (27%)
• Similarity: 115/317 - (36%)
• Gaps: 60/317 - (18%)

  Fly   368 AAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSAST 432
            ||.|..|.:.|.....|.: .||.:.|..|||........       |.|.....|.:.|..
  Rat    26 AAEAKGSGRAAQGDGVREE-EEEDDDDPEDEDPEQARRRR-------LQRRRQQRAGSGPGG--- 79

  Fly   433 SASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPF----GHPRQWSYERDEEMQERLDDDQSED 493
                  :|..:.|.      |.|....|   |..||    |...:|...........|..|.|:.
  Rat    80 ------EARARALG------LGPRPPPG---PGPPFALGCGGATRWYPRAQGGYGGGLSPDTSDR 129

  Fly   494 MSAQDLNDMDQDD----MCDDGSDIDDPSSETDSKKGGSRNGD-------GKSGGGGGGGSKPRR 547
            .|.:...||.:.:    .|.....:....:......||....:       ..:..|...|.:.::
  Rat   130 DSPETGEDMGRAESAWPRCPGPGAVPREVTTQGPAAGGEEAAELAEAPAVAAAAAGEARGGRRKK 194

  Fly   548 ARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSP 612
            .||.|:..|:..||:.|...||||..||..||.||.||||||||||||||.|||:| ...::.:.
  Rat   195 TRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQ-LAAELEAA 258

  Fly   613 TIPPPGGGSF----------GPGAYASGLLYSHA--VPYPP------YGPYFHPLGA 651
            ::.|||....          .|.|....|.:..|  .|.||      .|...:||.|
  Rat   259 SLSPPGAQRLVRVPVLYHESPPAATGPTLPFPLAPPAPAPPPPLLGFSGALAYPLAA 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	33/55 (60%)
Hmx1	NP_001101833.2	Homeodomain	193..249	CDD:459649	33/55 (60%)