Protein Alignment slou and hlx1

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001418073.1
• Gene: hlx1 / 327096
• ZFINID: ZDB-GENE-030131-5304
• Length: 357
• Species: Danio rerio
• Alignment Length: 241
• Identity: 57/241 - (23%)
• Similarity: 84/241 - (34%)
• Gaps: 82/241 - (34%)

  Fly   401 NDGSHSTPS-------VCPVDLTRSVN--SSAAAN---PSSASTSASSDRDAATKRLAFSVE--- 450
            :.||...||       :.|..|...::  |.||.|   |:|.......||..:|.....|.|
Zfish    67 SSGSPLRPSPVTPDARLHPAYLRHGIHLTSRAAINAPPPTSKDLKFGIDRILSTDFEPKSKESPS 131

  Fly   451 -----NILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDD 510
                 :|:.||:.:...:.:.|:
Zfish   132 LRDLTSIVSPNRQSAVHVSASPY------------------------------------------ 154

  Fly   511 GSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRR--------------------ARTAFTYE 555
            .:.||...|||.|..|...|...:||......:.|.|                    :|..|:..
Zfish   155 FASIDPTMSETSSLMGSIGNAARQSGQHQFQDTFPGRPYAVLSKDTMPQTYKRKRSWSRAVFSNL 219

  Fly   556 QLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 601
            |...||.:|:..:|::..:|..||..|.||:.|||:||||||.||:
Zfish   220 QRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	25/76 (33%)
hlx1	NP_001418073.1	Homeodomain	206..266	CDD:459649	24/60 (40%)