DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and HOXD9

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_055028.3 Gene:HOXD9 / 3235 HGNCID:5140 Length:352 Species:Homo sapiens


Alignment Length:411 Identity:93/411 - (22%)
Similarity:124/411 - (30%) Gaps:179/411 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SAVFHLRAPSSSSTAPPS--PATSPLS--------PPTSPAMHSD-------------------- 269
            ||||     |:|.:|.||  ||.:.:|        ||...|..|:                    
Human    72 SAVF-----SASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEPLPGFPGGAG 131

  Fly   270 -----------QQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSA 323
                       :..||..:.|.|..|....|:.:...||            |.||.||.:|||  
Human   132 GGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAP------------ATAASTTSSSST-- 182

  Fly   324 LASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTS 388
              |.|:|......|::..|.|| ||.:.|...|   |...||||.........|.|||       
Human   183 --SLSSSSKRTECSVARESQGS-SGPEFSCNSF---LQEKAAAATGGTGPGAGIGAAT------- 234

  Fly   389 EELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENIL 453
                        ..|..|.||.|            :.:|....:....::..:..:     :..|
Human   235 ------------GTGGSSEPSAC------------SDHPIPGCSLKEEEKQHSQPQ-----QQQL 270

  Fly   454 DPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPS 518
            |||....|            |.:.|                                        
Human   271 DPNNPAAN------------WIHAR---------------------------------------- 283

  Fly   519 SETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLS 583
                                     ..|:.|..:|..|.:.||.:|....||:...|..:|..|:
Human   284 -------------------------STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILN 323

  Fly   584 LTETQVKIWFQNRRTKWKKQN 604
            |||.||||||||||.|.||.:
Human   324 LTERQVKIWFQNRRMKMKKMS 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 26/55 (47%)
HOXD9NP_055028.3 Hox9_act 11..>164 CDD:461369 22/96 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..208 25/98 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 14/82 (17%)
Homeodomain 286..337 CDD:459649 23/50 (46%)

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