DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and HOXD1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:379 Identity:82/379 - (21%)
Similarity:115/379 - (30%) Gaps:170/379 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 STAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSS-------QPPQQQQVAAPSDMDLER 304
            :.|.|||     |||.:||       .|.:.||..|.::.       :|.     |||       
Human    57 AAARPSP-----SPPAAPA-------RPSVPPPAAPQYAQCTLEGAYEPG-----AAP------- 97

  Fly   305 IKLVAAVAARTTQASSTSALA---------SASNSVSNASISISNSSSGSP----SGR-DLSDYG 355
                ||.|.........|..|         :|.:..|:...:.|...||..    ||: |.:.:|
Human    98 ----AAAAGGADYGFLGSGPAYDFPGVLGRAADDGGSHVHYATSAVFSGGGSFLLSGQVDYAAFG 158

  Fly   356 FRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVN 420
               :.|...|...|:|                           |.:.|:..|.|..|....:|| 
Human   159 ---EPGPFPACLKASA---------------------------DGHPGAFQTASPAPGTYPKSV- 192

  Fly   421 SSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQER 485
            |.|:..|::.||.                                       :|...:       
Human   193 SPASGLPAAFSTF---------------------------------------EWMKVK------- 211

  Fly   486 LDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRA-R 549
                                                       ||...|......|.:.|..| |
Human   212 -------------------------------------------RNASKKGKLAEYGAASPSSAIR 233

  Fly   550 TAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 603
            |.|:.:||..||.:|...:||:...|:.:|..|.|.:|||||||||||.|.||:
Human   234 TNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 27/56 (48%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 2/43 (5%)
Homeodomain 233..286 CDD:459649 26/52 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.

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