DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and HOXA1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:446 Identity:92/446 - (20%)
Similarity:127/446 - (28%) Gaps:210/446 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 HHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSP-AM 266
            |||.|.||:|| .|.::|               ...:|....|.|:..||..:...|.|.|| |:
Human    65 HHHHHHHHRHP-QPATYQ---------------TSGNLGVSYSHSSCGPSYGSQNFSAPYSPYAL 113

  Fly   267 HSDQQMS---PPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASAS 328
            :.:..:|   |..||                                              |..|
Human   114 NQEADVSGGYPQCAP----------------------------------------------AVYS 132

  Fly   329 NSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNV 393
            .::|:..:...:...|...|                      |..|.|....:|.:...|..|..
Human   133 GNLSSPMVQHHHHHQGYAGG----------------------AVGSPQYIHHSYGQEHQSLALAT 175

  Fly   394 DGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRD-AATKRLAFSVENILDPNK 457
            ..|.......||               ..|..:|:|.::|.:...| ...||         :|.|
Human   176 YNNSLSPLHASH---------------QEACRSPASETSSPAQTFDWMKVKR---------NPPK 216

  Fly   458 FTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETD 522
             ||.   .|.:|:..|                                                 
Human   217 -TGK---VGEYGYLGQ------------------------------------------------- 228

  Fly   523 SKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTET 587
                                  |...||.||.:||..||.:|...:||:...|:.:|.||.|.||
Human   229 ----------------------PNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNET 271

  Fly   588 QVKIWFQNRRTKWKKQN------------PGMD----------VNSPTIPPPGGGS 621
            ||||||||||.|.||:.            ||.|          .:||.:|.||..:
Human   272 QVKIWFQNRRMKQKKREKEGLLPISPATPPGNDEKAEESSEKSSSSPCVPSPGSST 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 29/55 (53%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..80 9/15 (60%)
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 35/226 (15%)
COG5576 176..>286 CDD:227863 47/208 (23%)
Antp-type hexapeptide 204..209 1/4 (25%)
Homeodomain 233..286 CDD:459649 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 12/47 (26%)

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