Protein Alignment slou and Nkx6-2

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001101028.1
• Gene: Nkx6-2 / 309095
• RGDID: 1307280
• Length: 277
• Species: Rattus norvegicus
• Alignment Length: 94
• Identity: 39/94 - (41%)
• Similarity: 57/94 - (60%)
• Gaps: 10/94 - (10%)

  Fly   511 GSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCER 575
            ||...||.....::.||..:.|||.          :.:|..|:.:|:.:||..|:.|:||:..||
  Rat   124 GSPWRDPRLAGSAQAGGVLDKDGKK----------KHSRPTFSGQQIFALEKTFEQTKYLAGPER 178

  Fly   576 LNLALSLSLTETQVKIWFQNRRTKWKKQN 604
            ..||.||.:||:|||:|||||||||:|::
  Rat   179 ARLAYSLGMTESQVKVWFQNRRTKWRKRH 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	29/55 (53%)
Nkx6-2	NP_001101028.1	Homeodomain	147..205	CDD:459649	30/67 (45%)