Protein Alignment slou and msx2b

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_571351.3
• Gene: msx2b / 30531
• ZFINID: ZDB-GENE-980526-492
• Length: 241
• Species: Danio rerio
• Alignment Length: 277
• Identity: 81/277 - (29%)
• Similarity: 113/277 - (40%)
• Gaps: 87/277 - (31%)

  Fly   429 SASTS---ASSDRDAATKRL-----AFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQER 485
            |||.|   :..|||...::.     .||||:::..:|  .||            .:||
Zfish     2 SASASLKESDGDRDMEQRKTQVSSHPFSVESLISSHK--TNK------------DFER------- 45

  Fly   486 LDDDQSEDMSAQDLNDMDQDDMCDDG---------SDIDDPSSETD---SKKGGSRNGDGKSGGG 538
                :.||:|:|......:|.....|         |.:...|.|.|   |....||....:.
Zfish    46 ----RREDVSSQFAQTEIRDSCGSAGIPKHFMLQTSPVKSESPEPDDCTSWVMNSRYSQTRQ--- 103

  Fly   539 GGGGSKP---------RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQ 594
                ..|         |:.||.||..||::||.||:..:|||:.||...:.||:|||||||||||
Zfish   104 ----ESPCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQ 164

  Fly   595 NRRTKWKK------------QNPGMDVNSPTIPPPGGGSFGPGAYASGLLYSHAVPY-------P 640
            |||.|.|:            ..|.:..|. ::|.|    .|...:::..||..:.||       .
Zfish   165 NRRAKAKRLQEAELEKLKLTAKPALHPNF-SLPLP----LGTQLHSAVSLYGQSYPYQRPLLPVA 224

  Fly   641 PYGPYFHPLG--AHHLS 655
            |.|.|..|||  .:||:
Zfish   225 PVGLYGTPLGYSMYHLA 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	33/55 (60%)
msx2b	NP_571351.3	Homeodomain	116..172	CDD:459649	33/55 (60%)