DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and hoxb8a

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:59 Identity:29/59 - (49%)
Similarity:39/59 - (66%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 604
            ||.|..::..|.:.||.:|....||:...|:.::.:|.|||.||||||||||.||||:|
Zfish   147 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 26/55 (47%)
hoxb8aXP_005171620.1 Homeodomain 147..203 CDD:459649 26/55 (47%)

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