DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and noto

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_571130.1 Gene:noto / 30260 ZFINID:ZDB-GENE-990415-75 Length:241 Species:Danio rerio


Alignment Length:100 Identity:43/100 - (43%)
Similarity:55/100 - (55%) Gaps:22/100 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 KSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRT 598
            |||       |.:|.||:||.:||..||.:|...:|:...||..||.:|.|||.|||:||||||.
Zfish   130 KSG-------KSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRI 187

  Fly   599 KWKKQN----------PGMDVNSPTIPPPGGGSFG 623
            ||:||:          .|:     |:||...||.|
Zfish   188 KWRKQSLEQQQAKLAKLGL-----TVPPKSPGSQG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 30/55 (55%)
notoNP_571130.1 COG5576 79..>193 CDD:227863 35/69 (51%)
Homeodomain 135..191 CDD:459649 30/55 (55%)

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