Protein Alignment slou and Hmx2

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001099773.1
• Gene: Hmx2 / 293538
• RGDID: 1565366
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 272
• Identity: 74/272 - (27%)
• Similarity: 100/272 - (36%)
• Gaps: 86/272 - (31%)

  Fly   344 GSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTP 408
            |.|:...:|.:..:..|||       ..:.:.:..|...||   ...|:|...:|:..:|..:..
  Rat    10 GCPAAGGVSSFTIQSILGG-------GPSEAPREPAGWPAR---KRSLSVSSEEEEPEEGWKAPA 64

  Fly   409 SVCPVDLTRSVNSSAAANP------------SSASTSASSDRDAATKRLAFSVENILDPNKFTGN 461
            ..|| |.......|...:|            |..:..|:|:|.
  Rat    65 CYCP-DPHGPKEPSPKHHPPIPFPCLGTPKGSGGAGPAASERT---------------------- 106

  Fly   462 KLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKG 526
                 ||..|   |:...:|.:|||                     ...||    ||      .|
  Rat   107 -----PFLSP---SHPDFKEEKERL---------------------LPAGS----PS------PG 132

  Fly   527 GSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKI 591
            ..|..||  |.....|:..::.||.|:..|:..||:.|...||||..||..||.||.|||||||.
  Rat   133 PERPRDG--GAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKT 195

  Fly   592 WFQNRRTKWKKQ 603
            ||||||.|||:|
  Rat   196 WFQNRRNKWKRQ 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	32/55 (58%)
Hmx2	NP_001099773.1	Homeodomain	150..206	CDD:459649	32/55 (58%)