DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Meox2

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_058845.2 Gene:Meox2 / 29279 RGDID:3079 Length:303 Species:Rattus norvegicus


Alignment Length:468 Identity:101/468 - (21%)
Similarity:131/468 - (27%) Gaps:230/468 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QSPPASVGSVSFSSPAQQRKLLELNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMH 203
            :||.|:...:   .|..|..|.......|::.||......:.::..:|    |.:.:.|:|.|..
  Rat    10 RSPHATAQGL---HPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYP----NEEGMFASQHHRG 67

  Fly   204 HHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHS 268
            ||.|.||.|    |.||.       ..|....:.:||  |..||  |||.|...|.         
  Rat    68 HHHHHHHHH----HHHQQ-------QQHQALQSNWHL--PQMSS--PPSAARHSLC--------- 108

  Fly   269 DQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSN 333
               :.|....|  |...|.||                                            
  Rat   109 ---LQPDSGGP--PELGSSPP-------------------------------------------- 124

  Fly   334 ASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDE 398
              :..|||||                ||......||.|                           
  Rat   125 --VLCSNSSS----------------LGSSTPTGAACA--------------------------- 144

  Fly   399 DSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKL 463
                         |.|..|...|.|                              :..|.:|:|.
  Rat   145 -------------PGDYGRQALSPA------------------------------EVEKRSGSKR 166

  Fly   464 PSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGS 528
            .|                                            |.||              |
  Rat   167 KS--------------------------------------------DSSD--------------S 173

  Fly   529 RNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWF 593
            :.|:.||    ...||||:.|||||.||:..||.:|....||:...|..:|::|.|||.|||:||
  Rat   174 QEGNYKS----EVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 234

  Fly   594 QNRRTKWKKQNPG 606
            ||||.|||:...|
  Rat   235 QNRRMKWKRVKGG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 28/51 (55%)
Meox2NP_058845.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 58/350 (17%)
Homeobox 190..243 CDD:395001 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..303
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I4662
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

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