Protein Alignment slou and ind

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 384
• Identity: 91/384 - (23%)
• Similarity: 131/384 - (34%)
• Gaps: 115/384 - (29%)

  Fly   256 SPLSPPTSPAMHSDQQMSPPIAPPQNPPHSS-----------QPPQQQQVAAPSDMDLERIKLVA 309
            ||...||:.|..:...|.|.|  |..|..:|           |..||||
  Fly    26 SPGGSPTAAAAVAAAAMLPSI--PMLPYPASYVGSYLFSLGIQQQQQQQ---------------- 72

  Fly   310 AVAARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATS 374
                   |.....|.|:|:.:.:.|::......|.||              |.|....|...|:.
  Fly    73 -------QQQQQHAAAAAAAAAAAAALQQHPHVSSSP--------------GSLYHPYAQLFASK 116

  Fly   375 RQIAA-ATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDR 438
            |:.:. :.|.....|..|:       :|..|...|.:..:..:..|.......|.|..||.|:..
  Fly   117 RKSSGFSNYEGCYPSPPLS-------ANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASS 174

  Fly   439 DAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMD 503
            .|:           ||   :|.|                .||...:|...:.|...::..|.:..
  Fly   175 SAS-----------LD---YTNN----------------FDEPQGKRFKHESSCSPNSSPLKNHS 209

  Fly   504 QDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTR 568
            .....:....|:|   ..||.|                     |.|||||..||:.||.:|....
  Fly   210 SGGPVEITPLIND---YADSSK---------------------RIRTAFTSTQLLELEREFSHNA 250

  Fly   569 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK---QNPGMDVNSPTIPPPGGGSFGP 624
            |||...|:.:|..|.|:|.||||||||||.|.||   ::|..::::.:...|......|
  Fly   251 YLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQASPVSP 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	30/55 (55%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	31/76 (41%)