DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and tlx1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_739571.1 Gene:tlx1 / 266964 ZFINID:ZDB-GENE-021021-2 Length:301 Species:Danio rerio


Alignment Length:331 Identity:76/331 - (22%)
Similarity:116/331 - (35%) Gaps:127/331 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAA-----------AAAAATSRQIAAATY 382
            |:....|..|:|     |..:|| |||    ||.:.:.|           .::.......:..:|
Zfish    25 NNADQGSCMITN-----PRMQDL-DYG----LGCIVSTAYNTMTGNYNVNNSSGYNGNSCSVGSY 79

  Fly   383 ARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAF 447
               :.:...||:||..:|: |....|:..|:.   ||:||.   |:||:|..|.........|..
Zfish    80 ---NMNLGANVNGNCLNSS-GVIRVPAHRPLG---SVHSSI---PTSAATVPSMGSMGTINNLTG 134

  Fly   448 SVENILDPN-KFTGNK--LPSGPF------GHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMD 503
            .....::.| ::|.::  :...||      |||.|                              
Zfish   135 LTFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQ------------------------------ 169

  Fly   504 QDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTR 568
                           :.|..||                    ::.||:||..|:..||.:|...:
Zfish   170 ---------------NRTPPKK--------------------KKPRTSFTRLQICELEKRFHRQK 199

  Fly   569 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP----------------------GMDVNS 611
            ||:..||..||.:|.:|:.|||.|||||||||::|..                      ...:|.
Zfish   200 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQEAFQKTINQ 264

  Fly   612 PTIPPP 617
            |..|.|
Zfish   265 PVTPDP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 28/55 (51%)
tlx1NP_739571.1 Homeodomain 177..233 CDD:459649 28/55 (51%)

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