DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and tlx1

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_739571.1 Gene:tlx1 / 266964 ZFINID:ZDB-GENE-021021-2 Length:301 Species:Danio rerio


Alignment Length:331 Identity:76/331 - (22%)
Similarity:116/331 - (35%) Gaps:127/331 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAA-----------AAAAATSRQIAAATY 382
            |:....|..|:|     |..:|| |||    ||.:.:.|           .::.......:..:|
Zfish    25 NNADQGSCMITN-----PRMQDL-DYG----LGCIVSTAYNTMTGNYNVNNSSGYNGNSCSVGSY 79

  Fly   383 ARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAF 447
               :.:...||:||..:|: |....|:..|:.   ||:||.   |:||:|..|.........|..
Zfish    80 ---NMNLGANVNGNCLNSS-GVIRVPAHRPLG---SVHSSI---PTSAATVPSMGSMGTINNLTG 134

  Fly   448 SVENILDPN-KFTGNK--LPSGPF------GHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMD 503
            .....::.| ::|.::  :...||      |||.|                              
Zfish   135 LTFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQ------------------------------ 169

  Fly   504 QDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTR 568
                           :.|..||                    ::.||:||..|:..||.:|...:
Zfish   170 ---------------NRTPPKK--------------------KKPRTSFTRLQICELEKRFHRQK 199

  Fly   569 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP----------------------GMDVNS 611
            ||:..||..||.:|.:|:.|||.|||||||||::|..                      ...:|.
Zfish   200 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILMQLQQEAFQKTINQ 264

  Fly   612 PTIPPP 617
            |..|.|
Zfish   265 PVTPDP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 27/51 (53%)
tlx1NP_739571.1 Homeobox 179..232 CDD:278475 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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