DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slou and Dlx5

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_037075.1 Gene:Dlx5 / 25431 RGDID:2506 Length:289 Species:Rattus norvegicus


Alignment Length:459 Identity:106/459 - (23%)
Similarity:139/459 - (30%) Gaps:223/459 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSD 299
            :.||..|.||..|....:|.      |||.|||...|.||.:      |.||        |..||
  Rat     2 TGVFDRRVPSIRSGDFQAPF------PTSAAMHHPSQESPTL------PESS--------ATDSD 46

  Fly   300 MDLERIKLVAAVAARTTQASSTSA-LASASNSVSNASISISNSSSGSPSGRDLSDYGFRI---QL 360
            .      ...|.||.....|.||| ...|.|.......|::.|::|.|: :..:|||:..   |.
  Rat    47 Y------YSPAGAAPHGYCSPTSASYRKALNPYQYQYHSVNGSAAGYPA-KAYADYGYASPYHQY 104

  Fly   361 GGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAA 425
            ||         |.:|..:|.:....:.:|                  |.|      |.||     
  Rat   105 GG---------AYNRVPSATSQPEKEVAE------------------PEV------RMVN----- 131

  Fly   426 NPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQ 490
                                                       |.|:                  
  Rat   132 -------------------------------------------GKPK------------------ 135

  Fly   491 SEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYE 555
                                                                 |.|:.||.::..
  Rat   136 -----------------------------------------------------KVRKPRTIYSSF 147

  Fly   556 QLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK----------QNPG---- 606
            ||.:|:.:|:.|:||::.||..||.||.||:|||||||||:|:|.||          .:|.    
  Rat   148 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDP 212

  Fly   607 MDVNSPTIP----PPGGG---SFGPGAY--------ASGLLYSHAVPY-----------PPYGPY 645
            |..|||..|    |.|..   |..|.|:        ||..|.:.|..|           ||.|..
  Rat   213 MACNSPQSPAVWEPQGSSRSLSHHPHAHPTTSNQSPASSYLENSASWYPSAASSINSHLPPPGSL 277

  Fly   646 FHPL 649
            .|||
  Rat   278 QHPL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 29/55 (53%)
Dlx5NP_037075.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 22/72 (31%)
DLL_N 32..118 CDD:463567 31/115 (27%)
Homeodomain 138..194 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..253 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..289 6/12 (50%)

Return to query results.
Submit another query.