DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Vax2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_036042.1 Gene:Vax2 / 24113 MGIID:1346018 Length:292 Species:Mus musculus


Alignment Length:323 Identity:82/323 - (25%)
Similarity:103/323 - (31%) Gaps:139/323 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 GPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGS----DIDDPSSETDSKKG 526
            |..|..|....:|.||...| .....|...|:||.       .|.||    :|...|:   |...
Mouse     2 GDGGAERDRGPKRREEPGGR-SGRHGEHRGAEDLR-------ADTGSASPREIAGTSA---SSPA 55

  Fly   527 GSRNGDGKSGGGGGGG----------------------------SKPRRARTAFTYEQLVSLENK 563
            |||...|.|.|....|                            .:|:|.||:||.|||..||.:
Mouse    56 GSRESGGDSDGQQALGETDHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME 120

  Fly   564 FKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN------------------------ 604
            |:..:|:...||..||..|:|:|||||:||||||||.||..                        
Mouse   121 FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNVLRL 185

  Fly   605 ----------------------PGMDV------------NSPTIPPPGGGSFGPGAYASGLLYSH 635
                                  ||:..            :||.:.|.      |.|.||.     
Mouse   186 LEQGRLLSVPRAPSLLALTPGLPGLPASHRGTSLVDPRNSSPRLNPM------PSASASS----- 239

  Fly   636 AVPYPPYGPYFHPLGAHHLSHSHSXNCKMQQRLLQLFEKRGRAVAGGAGPAAGSGSVDPKDKM 698
              |.||      ||.|         .|.....||.|          .||...||.:.:|..::
Mouse   240 --PLPP------PLPA---------ICFSSAPLLDL----------PAGYKLGSSAFEPYSRL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 31/55 (56%)
Vax2NP_036042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74 24/82 (29%)
Homeodomain 103..159 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..242 10/47 (21%)

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