DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and ceh-30

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:250 Identity:73/250 - (29%)
Similarity:104/250 - (41%) Gaps:69/250 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 SAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERL 486
            :|:.:|.:..:|:||          |.:.:||:.:              |...|:..|       
 Worm    27 AASTSPCNKISSSSS----------FRISDILEQS--------------PNNSSHSND------- 60

  Fly   487 DDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTA 551
                 .|.|.|.:..             |..:|...|..||.|.      |..|...|.|:|||.
 Worm    61 -----HDPSPQSIKS-------------DFSTSPRASSPGGDRM------GSPGSCKKSRKARTI 101

  Fly   552 FTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-NPGMDVNSPTIP 615
            ||.:||..|||.|:..:||||.:|::||..:.||:||||.|:||||||||:| ..|||:    :.
 Worm   102 FTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSGMDL----LS 162

  Fly   616 PPGGGSFGPGAYASGLLYSHAVPYPPYGPYFHPLG---------AHHLSHSHSXN 661
            .||..|.......|...:::.:...|.|.....:|         ||....|.|.|
 Worm   163 EPGNLSAVQNLIRSSPYWANYITALPMGTQLPMMGLPMSMIVPPAHAFQPSSSSN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 30/51 (59%)
ceh-30NP_508524.2 Homeobox 99..151 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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