DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and ceh-2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_491746.1 Gene:ceh-2 / 191615 WormBaseID:WBGene00000429 Length:209 Species:Caenorhabditis elegans


Alignment Length:221 Identity:69/221 - (31%)
Similarity:94/221 - (42%) Gaps:82/221 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 LAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQ---ERLDDDQSEDMSAQDLNDMDQDD 506
            |.||||.::|..|                .|.|.|.|.|   ::|::|:            :.|:
 Worm     3 LKFSVERLVDSEK----------------ESEEADVEEQNNLKKLEEDE------------EDDE 39

  Fly   507 MCDDGSDIDDPSSETDS---------KKGGSR---NGDGKSGGG------GGGGS---------- 543
            :|:. |..::|.|:|.|         :...|.   :|.|.||.|      |.|||          
 Worm    40 LCEK-SGKNEPLSQTLSYFDVLLPHVQMACSNPFISGIGASGSGDQNLNTGAGGSVWQHPWLELL 103

  Fly   544 ---------------------KPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTET 587
                                 |.:|.||||:..||:.||..|:...|:...||..||..||||||
 Worm   104 QSTTAAQFGDVTAGLFLQPLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTET 168

  Fly   588 QVKIWFQNRRTKWKK-QNPGMDVNSP 612
            |||:||||||||.|: :..|.|.|:|
 Worm   169 QVKVWFQNRRTKHKRVRLEGSDPNAP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 32/55 (58%)
ceh-2NP_491746.1 Homeodomain 127..183 CDD:459649 32/55 (58%)

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