DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Nkx2-9

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_032727.2 Gene:Nkx2-9 / 18094 MGIID:1270158 Length:235 Species:Mus musculus


Alignment Length:253 Identity:68/253 - (26%)
Similarity:98/253 - (38%) Gaps:81/253 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   440 AATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQ 504
            |.:.||.|:|.::|:        ||            |:|.:.:.|.:.......:|..|.....
Mouse     2 ATSGRLGFTVRSLLN--------LP------------EQDAKPRVRREQQTCVPQTAAWLESECS 46

  Fly   505 DDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRY 569
            ..:..|.|.::  :|..||.:..|...:..    |....|.|:.|..|:..|.:.||.:|:..||
Mouse    47 HYLSSDESGLE--TSPADSSQLASLRRESP----GSDPEKRRKRRVLFSKAQTLELERRFRQQRY 105

  Fly   570 LSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGM----------DVNS----------PT 613
            ||..||..||..|.||.|||||||||.|.|.|: :.||:          |:::          |.
Mouse   106 LSAPEREQLARLLRLTPTQVKIWFQNHRYKLKRGRAPGITEPSDMAASSDLHAAPGLLRRVVVPV 170

  Fly   614 I-------------------------------PPPGGGSFGPGAYASGLL--YSHAVP 638
            :                               |.||..:||||: |.||.  |.|..|
Mouse   171 LVHDRPPSNNGRGEGTSAVPQDKCSARLATACPVPGYTAFGPGS-ALGLFPAYQHLAP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 29/55 (53%)
Nkx2-9NP_032727.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..86 9/40 (23%)
Homeodomain 82..138 CDD:459649 29/55 (53%)

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