DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and ceh-19

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:205 Identity:67/205 - (32%)
Similarity:95/205 - (46%) Gaps:29/205 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 LAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDM--DQDDM 507
            :||::|::|:..        |.|......:..|.|.|.....|:::.|........:|  .|..|
 Worm     1 MAFNIESLLEKK--------SNPVEEGNDFEEENDSEKNGEEDEEEEEKNVIDGWTNMATSQLAM 57

  Fly   508 CDDGSDIDDPS-SETDSKKG-GSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYL 570
            ....:|:..|: .|.....| .:|..|.|.........|||:|.:|   .||..||.:|:|.:||
 Worm    58 FAIANDLRTPTLVELQMLLGVSARKHDYKRSRKSVCERKPRQAYSA---RQLDRLETEFQTDKYL 119

  Fly   571 SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG----MDVNSPTIPPPGGGSFGPGAYASGL 631
            ||.:|:.|:.:|:|||||:|.||||||||||||...    |..::||       |...|.....|
 Worm   120 SVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSIRQMVKDAPT-------STSVGVPFQSL 177

  Fly   632 LYSHAVPYPP 641
            |   ..|.||
 Worm   178 L---TPPTPP 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 28/51 (55%)
ceh-19NP_001023142.1 Homeobox 97..150 CDD:278475 31/55 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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