DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Msx1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:383 Identity:104/383 - (27%)
Similarity:136/383 - (35%) Gaps:131/383 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 ALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDT 387
            |.|:|..|:. ..:.:.:|:...|:|            ||:..|..|||||:..:          
Mouse     2 APAAAMTSLP-LGVKVEDSAFAKPAG------------GGVGQAPGAAAATATAM---------- 43

  Fly   388 SEELNVDGNDEDSND----------------GSHSTPSVCPVDLTRSVNSSAA--------ANPS 428
                   |.||:...                ..|..|......|..|..:.||        ..|.
Mouse    44 -------GTDEEGAKPKVPASLLPFSVEALMADHRKPGAKESVLVASEGAQAAGGSVQHLGTRPG 101

  Fly   429 S--ASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDD-- 489
            |  |..:.||.|...    .|||..:|        |||....         ...|..|:||..  
Mouse   102 SLGAPDAPSSPRPLG----HFSVGGLL--------KLPEDAL---------VKAESPEKLDRTPW 145

  Fly   490 -QSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFT 553
             ||...|......:             .|.:.|..|...:|              ||   ||.||
Mouse   146 MQSPRFSPPPARRL-------------SPPACTLRKHKTNR--------------KP---RTPFT 180

  Fly   554 YEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGMD----VNSPT 613
            ..||::||.||:..:|||:.||...:.|||||||||||||||||.|.|: |...::    ...|.
Mouse   181 TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPM 245

  Fly   614 IPP-------PGGGSFGPGAYASGLLYS-------HAVPYPPYGPYFHPLG--AHHLS 655
            :||       |.||.....|.|...|||       .|:|..|.|.|...:|  .:||:
Mouse   246 LPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMYHLT 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 33/55 (60%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53 13/59 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112 4/21 (19%)
PTZ00449 <99..>248 CDD:185628 62/199 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163 8/40 (20%)
Homeodomain 173..229 CDD:459649 36/72 (50%)

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