DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Gbx2

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:405 Identity:98/405 - (24%)
Similarity:142/405 - (35%) Gaps:115/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 PSAVFHLRAPSSSSTA---------PPSPATS-------PLSPPTSPAMHSDQQMSPPIAPPQNP 282
            |.::..::.|..||||         ||.|:..       |:..|..|.          :.||..|
Mouse     6 PPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPV----------VLPPPPP 60

  Fly   283 PHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSPS 347
            |..:.|....|.|.|......:|.        :......|:||......|....::....|.||.
Mouse    61 PPPALPQAALQPALPPAHPHHQIP--------SLPTGFCSSLAQGMALTSTLMATLPGGFSASPQ 117

  Fly   348 GRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDED---SNDGSHSTPS 409
            .::              ||||...|.........:   |.:|.|..|..|..   :.:||     
Mouse   118 HQE--------------AAAARKFAPQPLPGGGNF---DKAEALQADAEDGKAFLAKEGS----- 160

  Fly   410 VCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQW 474
                  ..:.:::.|...|.........:|.                    :|:...|.|....:
Mouse   161 ------LLAFSAAEAVQASLVGAVRGQGKDE--------------------SKVEDDPKGKEESF 199

  Fly   475 SYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGG 539
            |.|.|.                    |...||      ::...::..:...|.:.....:|||..
Mouse   200 SLESDV--------------------DYSSDD------NLPGQTAHKEEDPGHALEETPQSGGAA 238

  Fly   540 GGGS---KPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 601
            |..:   |.||.|||||.|||:.||.:|...:|||:.||..:|.:|.|:|.||||||||||.|||
Mouse   239 GSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303

  Fly   602 KQNPGMDVNSPTIPP 616
            :...| :.||.|..|
Mouse   304 RVKAG-NANSKTGEP 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 31/51 (61%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 18/117 (15%)
Homeobox 250..304 CDD:395001 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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