DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and barhl1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_004916717.1 Gene:barhl1 / 100491447 XenbaseID:XB-GENE-853661 Length:327 Species:Xenopus tropicalis


Alignment Length:333 Identity:93/333 - (27%)
Similarity:117/333 - (35%) Gaps:124/333 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 SDTSEELNVDGN----DEDSNDG------------SHSTPSVCPVDLTRSVNSSAAANPSSASTS 433
            |.:||..:|..:    |.|..||            ||..|.|            ..:.||.:.|.
 Frog    39 SPSSEVSSVCSSPPSPDRDCLDGVAGRQGVALAMESHLQPGV------------QLSAPSQSRTV 91

  Fly   434 ASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQD 498
            .||          |.:.:||...|......|....|.|                   :.|: |..
 Frog    92 TSS----------FLIRDILADCKPLATCAPYSSNGQP-------------------THDL-AHC 126

  Fly   499 LNDMDQDDMCDDGSDIDDPSSETDS--------KKGGSRNGDGKSGGGGGGGSKPRRARTAFTYE 555
            |.....||..|   .:|..||.|.|        |:.|.|..............|||:||||||..
 Frog   127 LASKAADDFRD---KLDKSSSSTSSESEYKGKVKEEGDREISSSRDSPPVRLKKPRKARTAFTDH 188

  Fly   556 QLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ----------------- 603
            ||..||..|:..:||||.:|:.||.||:||:||||.|:||||||||:|                 
 Frog   189 QLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSAL 253

  Fly   604 ------------------NPGMDV---NSPTIPPPG---------------GGSFGPGAY--ASG 630
                              :||..:   ..||.|||.               |||..|.|.  .:|
 Frog   254 QRMFPSPYFYPQSLVSNLDPGAALYLYRGPTAPPPALQRPLVPRILIHGLQGGSEPPPALPPLTG 318

  Fly   631 LLYSHAVP 638
            :|...|.|
 Frog   319 VLPRAAQP 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 35/55 (64%)
barhl1XP_004916717.1 Homeodomain 179..235 CDD:459649 35/55 (64%)

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