Protein Alignment slou and hoxc10

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001258236.1
• Gene: hoxc10 / 100487723
• XenbaseID: XB-GENE-486915
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 343
• Identity: 77/343 - (22%)
• Similarity: 124/343 - (36%)
• Gaps: 106/343 - (30%)

  Fly   279 PQNPPHSSQPPQQQ--QVAAPSDMDLERIKLVAAVAARTTQASSTS-------ALASASNSV--- 331
            |:|.....||..:|  ..:.|:::..|.:..:.:...|...|:..:       ...|:.:.|
 Frog    83 PKNTYRIEQPVARQLSSCSFPTNVKEENVCCMYSTDKRAKNATEAALYPNQMPETRSSDHEVPVP 147

  Fly   332 SNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGN 396
            |....|...|...:||.....|:                 .|:.:...:..|||:..|:....|.
 Frog   148 SYYRASQGYSMEKTPSCHTTGDF-----------------ETTFENRTSVSARSEILEQQQAGGK 195

  Fly   397 DEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGN 461
            .....:             |::.|.|.|.|.:::|.:||   |..|::
 Frog   196 GGFPEN-------------TKTDNQSLATNLTTSSATAS---DIKTEK----------------- 227

  Fly   462 KLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKG 526
            .||:     |:....|.|:|..:.                      .|..:|..|..::.|.|
 Frog   228 SLPA-----PKLPPSEGDKEPSKN----------------------TDTSTDNSDAEAKEDIK-- 263

  Fly   527 GSRNGDG-----KSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTE 586
             :.|..|     |||         |:.|..:|..|.:.||.:|....||:...||.::.|::||:
 Frog   264 -AENAAGNWLTAKSG---------RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTD 318

  Fly   587 TQVKIWFQNRRTKWKKQN 604
            .||||||||||.|.||.|
 Frog   319 RQVKIWFQNRRMKLKKMN 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	25/55 (45%)
hoxc10	NP_001258236.1	Homeodomain	278..334	CDD:459649	25/55 (45%)