DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and hmx2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:194 Identity:59/194 - (30%)
Similarity:84/194 - (43%) Gaps:29/194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 STSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDE---EMQERLDDDQSE 492
            ||.....:.|.....:|::::||...  |.::      |......|.|:.   ......:|:|.|
 Frog     2 STKEEPTKSAPATLSSFTIQSILQGT--TSDR------GRTAARVYTREAISCPSTSSDEDEQDE 58

  Fly   493 DMSAQDLNDMDQDD--------------MCDDGSDIDDPSSETDSKKGGSRN----GDGKSGGGG 539
            .......|..|..|              .|.:.:.:..||.:..:::..|..    ||....||.
 Frog    59 SWRGHGCNCPDPGDKDSKGQAPHPCGAHRCPNRTQMPSPSQQDYTEEKDSHYPQSLGDRHKDGGD 123

  Fly   540 GGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 603
            ..|:..::.||.|:..|:..||:.|...||||..||..||.||.|||||||.||||||.|||:|
 Frog   124 KMGNSKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 32/55 (58%)
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649 32/55 (58%)

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