DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and gbx2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_002932046.1 Gene:gbx2 / 100485559 XenbaseID:XB-GENE-855771 Length:340 Species:Xenopus tropicalis


Alignment Length:635 Identity:107/635 - (16%)
Similarity:211/635 - (33%) Gaps:186/635 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   715 PGKLSPSEMGGKTSLEKLQLSAQTPENELQHIGGT---SGFPPIANSSTFDYLYEFSETR----- 771
            |.:|||.::.....||:.....:|....|:.:.|:   ||...:::||....|....|..     
 Frog    31 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDSWILWG 95

  Fly   772 KVLEEFFKCPSTEDVEKFSDYNDSAEEEDEEDGEEEDGESLDVHY------------DYPVELER 824
            :::.|:      |||.|          :.|:..:|...:.:..|:            ..|::.:.
 Frog    96 RIVNEW------EDVRK----------KKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQY 144

  Fly   825 SKTIETTYIGNVNGAAGKQDTLVRSPKSPLLGDGPARREEDDDTADDPLHYSLNGDGGDGRKVYA 889
            |:.::.|                 ||...|:     ||   |.....|.|.........|::|. 
 Frog   145 SELLKMT-----------------SPCEKLI-----RR---DIARTYPEHNFFKEKDSLGQEVL- 183

  Fly   890 RKYSKNFN----YSPDTTDYDSNCGDYDSEISPQYGSDF--GLISGNGATMCDDLNNGVISATSG 948
                  ||    ||.           .|.|:....||.|  ||:                     
 Frog   184 ------FNVMKAYSL-----------VDREVGYCQGSAFIVGLL--------------------- 210

  Fly   949 APSGPGESLNCLFANNANNYTRYYAAMP-VLEDGL----------------------SSGHVSDS 990
            ....|.|...|:|.....:|.......| :.|.||                      .|.|.|..
 Frog   211 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSFHTSMY 275

  Fly   991 ENNLSANPMTGLLPPDLVT----------------VG-SVKQHGQAG----SNGGMMQSAGPATG 1034
            .::..........|..:.|                || ::.|..||.    ...||:|...... 
 Frog   276 ASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEGMLQHFQKVI- 339

  Fly  1035 PYGLLGAQSPSVTAKPSISSSPSMSKEMKAAQGSHVQQQQQQQQQQQQHQPQQQQQQNQGTNVEG 1099
            |:...|.....:.|...:..:   ||:||..:..:...:.::.::|.:.:..:.:.:.....:| 
 Frog   340 PHQFDGVPDKLIQAAYQVKYN---SKKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQRIE- 400

  Fly  1100 YFVNNTFRMGNLKLNSSML-HNASIFKNRD--------------PELESLYTINTIQSTPPPPAP 1149
                 |....:..|...:: |..|...|.|              .|.||...:..:|.   ....
 Frog   401 -----TLEKESASLADRLIQHKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQD---KVLD 457

  Fly  1150 APHRKSSI-DCDNMSLLQQQ------QQQQQQPGQQQKQHQLQHLQQLQQQQQQSQQQQQQQGQP 1207
            ...|.:|: |.:|::.||::      ::.:...|.::.:.|::.|:: ..|:..::...:.:..|
 Frog   458 IEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEE-HWQRHLARTTGRWKDPP 521

  Fly  1208 QQPQQSQQQQQFNHGQTTSADVQSTLKDIRLCLQKTKSLNLASGNQTRKA 1257
            ::...::.|.:....:...|:.|:.:::|:..:.:.::.|..:.|..|:|
 Frog   522 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRA 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649
gbx2XP_002932046.1 Homeodomain 240..296 CDD:459649 8/55 (15%)
Blue background indicates that the domain is not in the aligned region.

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