Protein Alignment slou and Hoxb2

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 158
• Identity: 55/158 - (34%)
• Similarity: 67/158 - (42%)
• Gaps: 35/158 - (22%)

  Fly   518 SSETDSKKGGS--RNGDGKSGGGGG----GGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERL 576
            |:.|.|....|  .:|.|....|.|    |||..||.|||:|..||:.||.:|...:||....|:
  Rat   109 SAATPSPAASSVRASGVGSPSDGPGLPESGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 173

  Fly   577 NLALSLSLTETQVKIWFQNRRTKWKKQ------------------NPGMDVNSPTIPPPGGGS-- 621
            .:|..|.|||.|||:||||||.|.|:|                  :.|.....||:.|....|
  Rat   174 EIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPDGEPGGLSAQDDAGEPAEEPTVSPGDVASHR 238

  Fly   622 -----FGPGAYASGLLYSHAVPYPPYGP 644
                 |.|...|.|   ....| ||..|
  Rat   239 LREACFLPAEAAQG---PRGAP-PPLPP 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	29/55 (53%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	29/55 (53%)