DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and meox2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001116898.1 Gene:meox2 / 100144655 XenbaseID:XB-GENE-852818 Length:300 Species:Xenopus tropicalis


Alignment Length:442 Identity:88/442 - (19%)
Similarity:128/442 - (28%) Gaps:234/442 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 HLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPH 231
            |::.|:......:.:|..:|    |.:.:..:|.|..||.|.||.|    |..|..|.....:.|
 Frog    35 HMSYPDLSSSSSSCILTGYP----NEEGMFGSQHHRGHHHHHHHHH----HHQQQQHQTLQSNWH 91

  Fly   232 PHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAA 296
                      .|..||                              ||.:..||.   ..||.:.
 Frog    92 ----------IPQMSS------------------------------PPASTRHSL---CLQQESG 113

  Fly   297 PSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSP--SGRDLSDYGFRIQ 359
            |.|:                 :.|.|.|.|.::|:.      :|||:|:.  :|    |||.:  
 Frog   114 PPDL-----------------SGSPSILCSNTSSLG------TNSSTGAACVTG----DYGRQ-- 149

  Fly   360 LGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAA 424
               ..:.|.|...|.::       :||:|          ||.:||:.                  
 Frog   150 ---TLSPAEAEKRTGKR-------KSDSS----------DSQEGSYK------------------ 176

  Fly   425 ANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDD 489
                                                                             
 Frog   177 ----------------------------------------------------------------- 176

  Fly   490 QSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTY 554
                                  ||::                           ||||:.|||||.
 Frog   177 ----------------------SDVN---------------------------SKPRKERTAFTK 192

  Fly   555 EQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG 606
            ||:..||.:|....||:...|..:|::|.|||.|||:||||||.|||:...|
 Frog   193 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGG 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 30/55 (55%)
meox2NP_001116898.1 Homeodomain 184..240 CDD:459649 30/55 (55%)

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