DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7956 and ATSAC1B

DIOPT Version :9

Sequence 1:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_201403.2 Gene:ATSAC1B / 836732 AraportID:AT5G66020 Length:593 Species:Arabidopsis thaliana


Alignment Length:566 Identity:167/566 - (29%)
Similarity:255/566 - (45%) Gaps:119/566 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLSSVDD--------IEC-------IGVTHGIVGVISLPNVYEPHLVVVKEASAVGVLYPPHLVY 84
            |:|.:|.        .||       |....|:||::.|  :...:||||.|:.:|| .:..|.:|
plant    34 DISRLDGSMKLIDQVAECNSLRVPKIRSIFGVVGMLKL--LAGSYLVVVTESESVG-SFLGHPIY 95

  Fly    85 KIKSICILSADDPDTDLPNCTKHTKSNQSTPTHSVSTSNNNNASVPSSGGGSSKSTKLFEGMNKT 149
            ||.|:..|..|                     ||:...:                          
plant    96 KINSLKFLPCD---------------------HSLENPH-------------------------- 113

  Fly   150 WGAVKSAGNTIKNTTQQAANLATKQVKSSVGIREPRHIERRITEELHKIFDETDSFYFSFDCDIT 214
                                            .|.:.:|......|..:.:.|...|||::.::|
plant   114 --------------------------------EEQKKMETDDYSRLLSVAERTTGLYFSYEINLT 146

  Fly   215 NNLQRHEAKSEESQ-----SQPDERFFWNKHMIRDLINLNDKTWILPIIQGFMQVENCVIGNECF 274
            ...||.....:||:     .|.:.||.||.:|:..||:.....::||:|||........||.:..
plant   147 LTAQRLHDLGDESKLLPLWRQAEPRFLWNNYMLEVLIDNKLDQFLLPVIQGSFHSFQTAIGRDIV 211

  Fly   275 TLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQILSFRHHQLSFTQVRGSVPIYWSQ----- 334
            .:.|::||...|.|||..|||.|..|..||:||||||:....:..||.|:|||:|..|.|     
plant   212 DITLIARRCSRRNGTRMWRRGADPDGYVANFVETEQIVRMNGYTSSFVQIRGSMPFMWEQIVDLT 276

  Fly   335 --PGYKYRPPPRLDRGVAETQQAFELHFTKELETYGRVCIVNLVEQSGKEKTIGDAYADHVIKLN 397
              |.::...|       .|..:..|.||....:.||.|..|:||.:.|.|..:.:.:|..:..:.
plant   277 YKPKFEIVQP-------EEAARIAERHFLDLRKKYGSVLAVDLVNKHGGEGRLSERFAGAMQHIT 334

  Fly   398 NDRLIYVTFDFHDYCRGMRFENVSALIDAVGPEAGAMGFHWRDQRG-MICNQKSVFRVNCMDCLD 461
            .|.:.|:.||||..|..:.||.::.|.:.:.......|:...:::| .:..|..:.|.||:||||
plant   335 GDDVRYLHFDFHHICGHIHFERLAILYEQMEDFLEKNGYFLLNEKGEKMKEQLGIVRTNCIDCLD 399

  Fly   462 RTNVVQTAIGKAVLESQLVKLGLSPPYTPI--PEQLKSPFMVLWANNGDIISRQYAGTNALKGDY 524
            ||||.|:.||:.:||.||.::|:......|  .:.....:.:||||:||.||.||:||.|||||:
plant   400 RTNVTQSMIGRKLLELQLKRIGVFGAEETIRSHQNFDECYKILWANHGDDISIQYSGTPALKGDF 464

  Fly   525 TRTGERKISGMMKDGMNSANRFFIQNFADSFRQCIIDLMQGQLLRA 570
            .|.|:|.|.|:::||.|:..|:::.||||..:|..|||:||..:.|
plant   465 VRYGQRTIQGVLQDGWNALARYYLNNFADGTKQDAIDLVQGHYIVA 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 77/250 (31%)
COG5329 <197..586 CDD:227637 138/389 (35%)
hSac2 663..768 CDD:289241
ATSAC1BNP_201403.2 COG5329 62..545 CDD:227637 161/538 (30%)
Syja_N 63..349 CDD:280532 97/374 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45662
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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