DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7956 and sacm1la

DIOPT Version :9

Sequence 1:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001038343.2 Gene:sacm1la / 558940 ZFINID:ZDB-GENE-060503-122 Length:586 Species:Danio rerio


Alignment Length:603 Identity:185/603 - (30%)
Similarity:275/603 - (45%) Gaps:129/603 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HRRTSEFSIKA---GWD-------------LSSVDDIECIGVTH---GIVGVISLPNVYEPHLVV 67
            |....:|.|:|   |.|             |:.:.||...|:|.   |::|.:.|  |...:|:|
Zfish    11 HSTPEKFYIEACDDGADDVLVIDRVSTEMTLAGIKDIPPSGITRPICGVMGTVRL--VAGMYLIV 73

  Fly    68 VKEASAVGVLYPPHLVYKIKSICILSADDPDTDLPNCTKHTKSNQSTPTHSVSTSNNNNASVPSS 132
            :.....||.|: .|.|:|.....::                 |.:.|..|.......:|      
Zfish    74 ITRKRKVGDLF-GHTVWKAVEFDVI-----------------SYKKTILHLTDIQMQDN------ 114

  Fly   133 GGGSSKSTKLFEGMNKTWGAVKSAGNTIKNTTQQAANLATKQVKSSVGIREPRHIERRITEELHK 197
                    |.|..|.          |.:.|                                   
Zfish   115 --------KTFLTMI----------NNVLN----------------------------------- 126

  Fly   198 IFDETDSFYFSFDCDITNNLQRHEAKSEESQ-----SQPDERFFWNKHMIRDLINLND-KTWILP 256
                ||.|||..|.|:|:..||....|.:.|     .:.|:||.||.:::|::|...: ..:..|
Zfish   127 ----TDGFYFCTDYDLTHTQQRLSNTSPDFQEMSLLERADQRFMWNGNLLREIIAQPELHKFAFP 187

  Fly   257 IIQGFMQVENCVIGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQILSFRHHQLSF 321
            :|.||:.::.|.|..:.|...::||||..|||.||..||:|.:|:.||:||||||:.|.:.:.||
Zfish   188 VIHGFIVMKPCCINGKVFEWIIISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIVQFNNARASF 252

  Fly   322 TQVRGSVPIYWSQ-PGYKYRPPPRLDRGVAETQQAFELHFTKELETYGRVCIVNLVEQSGKEKTI 385
            .|.|||:|.:||| |..||:|.|.:.:. .........||..::..||:..|:|||.|.|.|..:
Zfish   253 VQTRGSIPFFWSQRPNLKYKPKPLISKD-TNHMDGLRRHFESQVLIYGKQVILNLVNQKGSELPL 316

  Fly   386 GDAYADHVIKLNNDRLIYVTFDFHDYCRGMRFENVSALIDAVGPEAGAMGFHWRDQRGMICNQKS 450
            ..|:|..|..:.|..:.|:.||||..|..||:..:..|:|||.......|:......|.:.:::|
Zfish   317 EQAFAKMVSSMENGFIKYIAFDFHKECSKMRWHRLQILVDAVSDMQEEFGYFMVSSDGKVLSEQS 381

  Fly   451 -VFRVNCMDCLDRTNVVQTAIGKAVLESQLVKLGLSPPYTPIPEQ--LKSPFMVLWANNGDIISR 512
             .||.|||||||||||:|:.:.:..|:|||.::|:......|.||  .:..:...||:|.:..::
Zfish   382 GTFRSNCMDCLDRTNVIQSLLARRSLQSQLQRMGVLHVGQKIEEQADFEKIYKNAWADNANACAK 446

  Fly   513 QYAGTNALKGDYTRTGERKISGMMKDGMNSANRFFIQNFADSFRQCIIDLMQGQLLRAEDLQEDE 577
            |||||.|||.|:||||:|...|::.||.||..|::..||:|.|||..|||..|      :...||
Zfish   447 QYAGTGALKTDFTRTGKRTHWGLVMDGWNSMIRYYKNNFSDGFRQDSIDLFLG------NYSVDE 505

  Fly   578 VLSTILQILTPETRPPLH 595
            .          ::..|||
Zfish   506 T----------DSLTPLH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 83/245 (34%)
COG5329 <197..586 CDD:227637 150/398 (38%)
hSac2 663..768 CDD:289241
sacm1laNP_001038343.2 COG5329 56..526 CDD:227637 174/558 (31%)
Essential for phosphatidylinositol-4-phosphate phosphatase activity. /evidence=ECO:0000250|UniProtKB:Q9NTJ5 451..586 31/79 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153624at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.