DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7956 and Sh2d1b2

DIOPT Version :9

Sequence 1:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001028671.1 Gene:Sh2d1b2 / 545378 MGIID:3622649 Length:132 Species:Mus musculus


Alignment Length:170 Identity:37/170 - (21%)
Similarity:58/170 - (34%) Gaps:57/170 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 LPIIQGFMQVENCVIGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYV--ETEQILSFRHH 317
            ||...|      |:...||..|.|              :.|||     .|::  ::|.:......
Mouse     3 LPYYHG------CLTKRECEALLL--------------KGGVD-----GNFLIRDSESVPGALCL 42

  Fly   318 QLSFTQVRGSVPIYWSQPGYKYRPPPRLDRGVAETQQAFELHFTKELETYGRVCIVNLVEQSGKE 382
            .:||.::..:..|:..:.|| ||         .||:.:..           :....||.|...|.
Mouse    43 CVSFKKLVYNYRIFREKNGY-YR---------IETEPSTP-----------KTIFPNLEELISKF 86

  Fly   383 KTIGDAYADHVIKLNNDRLIYVTFDFHDYCRGMRFENVSA 422
            ||.|...   |:.|:|..:      ...:|.|.|..|:.|
Mouse    87 KTPGQGM---VVHLSNPIM------RSGFCPGARRLNLEA 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 32/159 (20%)
COG5329 <197..586 CDD:227637 37/170 (22%)
hSac2 663..768 CDD:289241
Sh2d1b2NP_001028671.1 SH2_SAP1 1..103 CDD:198205 32/154 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836231
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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