DRSC/TRiP Functional Genomics Resources

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Protein Alignment sp3 and FIG4

DIOPT Version :10

Sequence 1:NP_001036740.2 Gene:sp3 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_608841.1 Gene:FIG4 / 33658 FlyBaseID:FBgn0031611 Length:858 Species:Drosophila melanogaster


Alignment Length:485 Identity:136/485 - (28%)
Similarity:208/485 - (42%) Gaps:120/485 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 TIKNTTQQAANLATKQVKSSVGIREPRHIERRITEELHKIFDETDSFYFSFDCDITNNLQRHE-- 221
            |||:|.....|..|.|       |.|...|.|.......| |...:||||:..|:|..||.:|  
  Fly   118 TIKDTVMVRVNEVTSQ-------RPPHPHEDRYKRMFQNI-DLRSNFYFSYSYDLTRTLQYNESA 174

  Fly   222 -----AKSEESQSQP--------------------------DERFFWNKHMIRDLINLNDKTWIL 255
                 ||.:..:.:|                          .:||.||.::::.:..:..|.|:|
  Fly   175 PRYVGAKVDLDRDEPLPDWNTLTSNVDKAHERVDYAFRSDSRKRFVWNAYLLQPMEGIMLKDWLL 239

  Fly   256 PIIQGFMQVENCV-IGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQILSFRHHQL 319
            .:..||:. ::|: |......:.||:|||...||||:.:||.:.:|:.||.||||||:|......
  Fly   240 EVTHGFVS-QSCISIFGRHVNVCLVARRSSRFAGTRFLKRGANFQGDVANEVETEQIVSDGQRIC 303

  Fly   320 SFTQVRGSVPIYWSQPGYKYRPPPRLDRGVAET-QQAFELHFTKELETYGR-VCIVNLVE--QSG 380
            :|||:|||:|.:|||...|..|.|::...:.:. .|...|||.:.|..||. :.::|||:  :..
  Fly   304 AFTQMRGSIPSHWSQDISKMVPKPQIQLDICDPYAQTPSLHFERLLFHYGAPLIMLNLVKKRERR 368

  Fly   381 KEKTIGDAYADHVIKLNND------RLIYVTFDFHDYCR---------------------GMRFE 418
            |.::|.....::.|:..|.      |:.::.||.....|                     ||.|:
  Fly   369 KHESIISKELEYSIRYLNQFLPPPHRMKHIHFDMARQSRLSGGNVMEQLAIHAESIVQMTGMFFK 433

  Fly   419 NVSALIDAVGPEAGAMGFHWRDQRGMICNQKSVFRVNCMDCLDRTNVVQTAIGKAVLESQLVKLG 483
                   |.|.|.|.              |..:.|.||:|||||||..|.||||..|..||.:||
  Fly   434 -------AAGSEPGL--------------QTGIVRTNCVDCLDRTNSAQFAIGKCALGHQLERLG 477

  Fly   484 LSPPYTPIPEQLKSPFMV-----------LWANNGDIISRQYAGTNALK--GDYTRTGERKISGM 535
            .          :||..:.           |:..:||.::.||.|:..:.  ..|.:|......| 
  Fly   478 F----------VKSAKLEFDSDCVTMLENLYEEHGDTLALQYGGSQLVHRIKTYRKTAPWGSQG- 531

  Fly   536 MKDGMNSANRFFIQNFADSFRQCIIDLMQG 565
             .|.|.:.:|::...|:|:.:|..|:|..|
  Fly   532 -SDVMQTLSRYYSNTFSDTEKQHSINLFLG 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sp3NP_001036740.2 COG5329 <197..586 CDD:227637 125/447 (28%)
hSac2 663..768 CDD:463592
FIG4NP_608841.1 Syja_N 85..407 CDD:460545 87/297 (29%)
Blue background indicates that the domain is not in the aligned region.

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