DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sp3 and Ocrl

DIOPT Version :10

Sequence 1:NP_001036740.2 Gene:sp3 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_569962.2 Gene:Ocrl / 31157 FlyBaseID:FBgn0023508 Length:850 Species:Drosophila melanogaster


Alignment Length:570 Identity:118/570 - (20%)
Similarity:190/570 - (33%) Gaps:189/570 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 IISRQYAGTNALKG-DYTRTGERKISGMMKDGMNSANRFFI-------QNF---ADSFRQCIIDL 562
            ::|.|..||.|:.. .|.||           .::|||...|       .||   .||  :..|..
  Fly    55 LVSSQSGGTFAIIAFSYLRT-----------PLSSANELIINKVFAIDHNFQLRQDS--KSSITT 106

  Fly   563 MQGQLLRAED------------LQEDEVLSTILQILT------PETRPP---LHGYYNPGVLGPE 606
            .|..|..|||            ...:|.::.::...:      |||...   |:.|...|.:..|
  Fly   107 QQFDLSTAEDGPIKYYYYATESHHYEEFVAKVISFKSTMAQHDPETVLNFRWLNDYRQIGEVKQE 171

  Fly   607 LQLLESIVTTSYYLARFKDSYRQ-ATIDLMLGNQVSSESLSALGGQAGPDENDGTENAEQAKLLV 670
            |:..|     |.|:. :||.... ||.:  :.|:..|:|.:.|                      
  Fly   172 LKKRE-----SEYIV-YKDIIIYCATWN--VNNKTCSDSNNPL---------------------- 206

  Fly   671 EDCRRLLLGTAQYP--VGAWGLIDAD-PSSGDINETEVDTIL-----LLTDDCYIVAEYD---SH 724
                |..|..::.|  :.|.||.:.| |:...:|.|:|..|.     .:.|..:...||:   ||
  Fly   207 ----RAWLACSEKPPDIYAIGLQELDTPTKAMLNSTQVQAIEKQWIDKMMDSVHPDVEYEILMSH 267

  Fly   725 LDKIVRFEKVQLTQVRLIELGMH----QQTKIFQG-------SAPAHLCLRLNYSVDEQEGYFHM 778
                 |.....||.:...:|..|    :...:.:|       .....:.|:||      ||    
  Fly   268 -----RLVATMLTVIVRKQLRQHIIRCRPKSVARGIFNTLGNKGGVAISLQLN------EG---- 317

  Fly   779 FRSANLRFFN-----NMAYVIKTQEEVAESMTSIVEMFRIALDNAGNT-----EVRYITGGVLQR 833
                |:.|.|     :|.||    ||..:...:|||..|.   :.|.|     .:.::  |.|..
  Fly   318 ----NICFVNSHLAAHMGYV----EERNQDYNAIVEGIRF---DDGRTISDHDHIFWV--GDLNY 369

  Fly   834 RKSKLPTLDVPRGM--PRNLSESQLVQLSSKALSNMAGQFSKLGQTFKKPQAHPSSLAATMNPQV 896
            |      :..|.|.  |..||::|..:|..        |:.:|.|..::.:.........:..:.
  Fly   370 R------IQEPPGQQRPGPLSDAQTYELLL--------QYDQLRQEMRRGKCFEGYTEGEIKFRP 420

  Fly   897 MRQRDSEIESGQEAEK--------AVFTLGRK----------------HRNSNSASSTDTDEHDN 937
            ..:.|...::...:||        .|...|.:                |:...:.........|.
  Fly   421 TYKYDPGTDNYDSSEKQRAPAYCDRVLWKGTRIEQLAYNSIMEIRQSDHKPVYAVFQVKVKTRDE 485

  Fly   938 SLYEPEVDSDVEIAMDKSNYNENAFLPSVG-----IVMGNQKEDSPSSSD 982
            ..|: .|..:|..|:||   .||...|.:.     |..|..:.:.||:.|
  Fly   486 VKYK-RVQEEVLKAVDK---RENDNQPQINVEKTVIDFGTVRFNEPSTRD 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sp3NP_001036740.2 COG5329 <197..586 CDD:227637 23/99 (23%)
hSac2 663..768 CDD:463592 26/126 (21%)
OcrlNP_569962.2 INPP5B_PH 23..160 CDD:465268 26/117 (22%)
INPP5c_INPP5B 185..478 CDD:197327 67/362 (19%)
RhoGAP_OCRL1 614..823 CDD:239845
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.