DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7956 and Sacm1l

DIOPT Version :9

Sequence 1:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001344426.1 Gene:Sacm1l / 116482 RGDID:69223 Length:609 Species:Rattus norvegicus


Alignment Length:553 Identity:182/553 - (32%)
Similarity:275/553 - (49%) Gaps:98/553 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DIECIGVT---HGIVGVISLPNVYEPHLVVVKEASAVGVLYPPHLVYKIKSICILSADDPDTDLP 102
            |:....||   :||:|.|.|  |...:|||:.:...||..: .|:::|.....:|          
  Rat    47 DVPPSAVTRPIYGIMGTIHL--VAGNYLVVITKKMKVGEFF-NHVIWKATDFDVL---------- 98

  Fly   103 NCTKHTKSNQSTPTHSVSTSNNNNASVPSSGGGSSKSTKLFEGMNKTWGAVKSAGNTIKNTTQQA 167
                   |.:.|..|.......:                     |||:.|:              
  Rat    99 -------SYKKTMLHLTDIQLQD---------------------NKTFLAM-------------- 121

  Fly   168 ANLATKQVKSSVGIREPRHIERRITEELHKIFDETDSFYFSFDCDITNNLQRHEAKSEESQ---- 228
                                       |:.:. .||.||||...|:|:.|||....|.|.|    
  Rat   122 ---------------------------LNHVL-STDGFYFSTTYDLTHTLQRLSNTSPEFQEMSL 158

  Fly   229 -SQPDERFFWNKHMIRDLINLND-KTWILPIIQGFMQVENCVIGNECFTLALVSRRSRHRAGTRY 291
             .:.|:||.||.|::|:|....: ..:.||::.||:.:.:|.|..:.|...|:||||..|||.||
  Rat   159 LERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRY 223

  Fly   292 KRRGVDEKGNCANYVETEQILSFRHHQLSFTQVRGSVPIYWSQ-PGYKYRPPPRLDRGVAETQQA 355
            ..||:|.:|:.||:||||||:.:..::.||.|.|||:|::||| |..||:|.|:::: ||.....
  Rat   224 YVRGIDSEGHAANFVETEQIVHYSGNRASFVQTRGSIPVFWSQRPNLKYKPDPQINK-VANHMDG 287

  Fly   356 FELHFTKELETYGRVCIVNLVEQSGKEKTIGDAYADHVIKLNNDRLIYVTFDFHDYCRGMRFENV 420
            |:.||..::..||:..|:|||...|.||.:...:|..|..|.:..:.|:.||||..|:.||::.:
  Rat   288 FQRHFDSQVIIYGKQVIINLVNHKGSEKPLEQTFAKMVSSLGSGMIRYIAFDFHKECKNMRWDRL 352

  Fly   421 SALIDAVGPEAGAMGFHWRDQRG-MICNQKSVFRVNCMDCLDRTNVVQTAIGKAVLESQLVKLGL 484
            |.|:|.|......:.:...|..| ::.||:.|||.|||||||||||:|:.:.:..|::||.:||:
  Rat   353 SILLDQVAEMQDELSYFLVDSAGKVVTNQEGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGV 417

  Fly   485 SPPYTPIPEQ--LKSPFMVLWANNGDIISRQYAGTNALKGDYTRTGERKISGMMKDGMNSANRFF 547
            ......:.||  .:..:...||:|.:..::|||||.|||.|:||||:|...|::.||.||..|::
  Rat   418 LHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLVMDGFNSLLRYY 482

  Fly   548 IQNFADSFRQCIIDLMQGQLLRAEDLQEDEVLS 580
            ..||:|.|||..|||..|. ...::|.....||
  Rat   483 KNNFSDGFRQDSIDLFLGN-YSVDELDSHSPLS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 89/245 (36%)
COG5329 <197..586 CDD:227637 157/394 (40%)
hSac2 663..768 CDD:289241
Sacm1lNP_001344426.1 COG5329 57..513 CDD:227637 177/540 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153624at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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