DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7956 and sacm1l

DIOPT Version :9

Sequence 1:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster
Sequence 2:NP_001344516.1 Gene:sacm1l / 100497354 XenbaseID:XB-GENE-920710 Length:608 Species:Xenopus tropicalis


Alignment Length:573 Identity:187/573 - (32%)
Similarity:274/573 - (47%) Gaps:113/573 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LSSVDDIECIGVT---HGIVGVISLPNVYEPHLVVVKEASAVGVLYPPHLVYKIKSICILSADDP 97
            |:...||....:|   :||:|.|.|  |...:|:|:.....||.|. .|.::|.....|:     
 Frog    41 LTGKKDIPPSAITRAIYGILGTIRL--VAGMYLIVITRKKKVGDLL-NHSIWKATDFDII----- 97

  Fly    98 DTDLPNCTKHTKSNQSTPTHSVSTSNNNNASVPSSGGGSSKSTKLFEGMNKTWGAVKSAGNTIKN 162
                        |.:.|..|...|...:|              |.|..|                
 Frog    98 ------------SYKKTMLHLTDTQLQDN--------------KAFLAM---------------- 120

  Fly   163 TTQQAANLATKQVKSSVGIREPRHIERRITEELHKIFDETDSFYFSFDCDITNNLQRHEAKSEES 227
                                        |:..|     ..|.||||...|:|:.|||....|.|.
 Frog   121 ----------------------------ISHVL-----SVDGFYFSVSYDLTHTLQRLSNTSPEF 152

  Fly   228 Q-----SQPDERFFWNKHMIRDLINLND-KTWILPIIQGFMQVENCVIGNECFTLALVSRRSRHR 286
            |     .:.|:||.||.|::|:.....: :.:.:|::.||:.:.:|.|..:.|...|:||||..|
 Frog   153 QEMSLLERADQRFVWNGHLLREFSAQPEIQKFAIPVVHGFIAIHSCSINGKYFDWILISRRSCFR 217

  Fly   287 AGTRYKRRGVDEKGNCANYVETEQILSFRHHQLSFTQVRGSVPIYWSQ-PGYKYRPPPRLDRGVA 350
            ||.||..||:|.:|:.||:||||||:.:..::.||.|.|||:|.|||| |..||:|.|::.:.| 
 Frog   218 AGVRYYVRGIDSEGHAANFVETEQIVHYNGNKASFVQTRGSIPFYWSQRPNLKYKPKPQISKAV- 281

  Fly   351 ETQQAFELHFTKELETYGRVCIVNLVEQSGKEKTIGDAYADHVIKLNNDRLIYVTFDFHDYCRGM 415
            .....|:.||..::.:||:..::|||.|.|.||.:..|::..|..|.|..|.|:.||||..|..|
 Frog   282 NHMDGFQRHFDSQIISYGKQVVLNLVNQKGSEKPLEQAFSQMVSGLGNGMLRYIAFDFHKECSRM 346

  Fly   416 RFENVSALIDAVGPEAGAMGFHWRDQRG-MICNQKSVFRVNCMDCLDRTNVVQTAIGKAVLESQL 479
            |::.:..|:|.|.......|:...|..| ::..|:.:||.|||||||||||||:.:.:..|:.||
 Frog   347 RWDRLQILVDQVSETQDDFGYFLVDSDGKVVSQQEGIFRSNCMDCLDRTNVVQSLLARRSLQFQL 411

  Fly   480 VKLGLSPPYTPIPEQL--KSPFMVLWANNGDIISRQYAGTNALKGDYTRTGERKISGMMKDGMNS 542
            .:||:......|.||:  :..:...||:|.:..::|||||.|||.|:||||:|...|::.||.||
 Frog   412 QRLGVLHVGQRIEEQIQFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQWGLLMDGWNS 476

  Fly   543 ANRFFIQNFADSFRQCIIDLMQGQLLRAEDLQEDEVLSTILQILTPETRPPLH 595
            ..|::..||:|.|||..|||..|      :...:||.|:          .|||
 Frog   477 LMRYYKNNFSDGFRQDSIDLFLG------NYSVEEVYSS----------SPLH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 89/245 (36%)
COG5329 <197..586 CDD:227637 156/398 (39%)
hSac2 663..768 CDD:289241
sacm1lNP_001344516.1 COG5329 33..518 CDD:227637 187/573 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153624at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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