DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HMRA1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_010021.1 Gene:HMRA1 / 850459 SGDID:S000000694 Length:126 Species:Saccharomyces cerevisiae


Alignment Length:63 Identity:19/63 - (30%)
Similarity:34/63 - (53%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 YQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTK 271
            |.:....|..|.::|.:....|.||:.|.:::.|.|.|:..:|:...:|..||:.||.|:|.:
Yeast    62 YHHIKKEKSPKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMR 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 19/63 (30%)
Homeodomain 218..274 CDD:459649 17/54 (31%)
HMRA1NP_010021.1 HOX 70..126 CDD:197696 17/55 (31%)

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