DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HAT2

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_199548.1 Gene:HAT2 / 834784 AraportID:AT5G47370 Length:283 Species:Arabidopsis thaliana


Alignment Length:325 Identity:62/325 - (19%)
Similarity:107/325 - (32%) Gaps:121/325 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFE-TSHHHHNNNNHLLS----------SS 103
            :.::..||..:|....:.|::.:.||:      ::.|: ||.....:.|...|          ||
plant    16 FSQNHNPLQMNLNPNSSLSNNLQRLPW------NQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSS 74

  Fly   104 PGSSSNNNNSGEKGEEKELL-----QQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGH 163
            |.|:.::..||::.|.:.:.     ..:|||                                  
plant    75 PNSTISSTISGKRSEREGISGTGVGSGDDHD---------------------------------- 105

  Fly   164 VLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQ 228
              .:.|.|                            ..:|......::.....|||.|.|  :.|
plant   106 --EITPDR----------------------------GYSRGTSDEEEDGGETSRKKLRLS--KDQ 138

  Fly   229 VAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWR----------------RQTA 277
            .|.||:.|.:...|...::.|||:.|.:|..||:.||||||.:.:                :.|.
plant   139 SAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTE 203

  Fly   278 EEREAERQAANRLMLSLQAEAISKGFAPPS------------APLGSQGGVNGAPLAALHGLQPW 330
            |.|..:::|.....|.|..:...: ..||:            .|..|....|..|::    :.||
plant   204 ENRRLQKEAMELRTLKLSPQFYGQ-MTPPTTLIMCPSCERVGGPSSSNHHHNHRPVS----INPW 263

  Fly   331  330
            plant   264  263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 35/146 (24%)
Homeodomain 218..274 CDD:459649 23/71 (32%)
HAT2NP_199548.1 HD-ZIP_N 8..91 CDD:461370 18/80 (23%)
HOX 129..183 CDD:197696 24/55 (44%)
HALZ 185..228 CDD:128634 6/43 (14%)

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