DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HB51

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_195999.2 Gene:HB51 / 831723 AraportID:AT5G03790 Length:235 Species:Arabidopsis thaliana


Alignment Length:82 Identity:27/82 - (32%)
Similarity:43/82 - (52%) Gaps:4/82 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 PIARRIGHPYQ--NRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVK 262
            |.:.:|.:.|:  |......||.|  .|..|:|.||:.|.::..|.|..:..|:|.|.:...|:.
plant    57 PESEKIMNAYRFPNNNNEMIKKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIA 119

  Fly   263 TWFQNRRTKWRRQTAEE 279
            .||||||.:|:.:..|:
plant   120 VWFQNRRARWKAKQLEQ 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 27/82 (33%)
Homeodomain 218..274 CDD:459649 22/55 (40%)
HB51NP_195999.2 Homeodomain 77..130 CDD:459649 21/54 (39%)
HALZ 132..166 CDD:460477 1/5 (20%)

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