DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HB16

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_195716.1 Gene:HB16 / 830169 AraportID:AT4G40060 Length:294 Species:Arabidopsis thaliana


Alignment Length:52 Identity:20/52 - (38%)
Similarity:28/52 - (53%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 QVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE 279
            ||..|||.|..:..|....:..||:.|.:...||..||||||.:|:.:..|:
plant    67 QVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 20/52 (38%)
Homeodomain 218..274 CDD:459649 19/45 (42%)
HB16NP_195716.1 Homeodomain 59..112 CDD:459649 18/44 (41%)
HALZ 114..155 CDD:460477 1/5 (20%)

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