DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HAT1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:144 Identity:44/144 - (30%)
Similarity:64/144 - (44%) Gaps:27/144 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 RKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWR-------- 273
            |||.|.|  :.|.|.||..|.:...|...::.|||:.|.:|..||:.||||||.:.:        
plant   134 RKKLRLS--KDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDC 196

  Fly   274 --------RQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPL--GSQGGVNGAPLAALH--- 325
                    :.|.|.|..|::||....|.|......: .:||:..|  .|...|.| |.::.|   
plant   197 EYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQ-MSPPTTLLMCPSCERVAG-PSSSNHNQR 259

  Fly   326 --GLQPWAEASHAA 337
              .|.||.:.:|.:
plant   260 SVSLSPWLQMAHGS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 36/115 (31%)
Homeodomain 218..274 CDD:459649 23/71 (32%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:461370
HOX 134..188 CDD:197696 24/55 (44%)
HALZ 190..233 CDD:128634 8/43 (19%)
Blue background indicates that the domain is not in the aligned region.

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