Protein Alignment C15 and Hoxa5

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_077365.1
• Gene: Hoxa5 / 79241
• RGDID: 620609
• Length: 381
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 75/317 - (23%)
• Similarity: 110/317 - (34%)
• Gaps: 83/317 - (26%)

  Fly     4 HEEDDHE------------HENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETP 56
            |...||.            |...:|......::.|..........|..:.....|.|.     .|
  Rat   133 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAAGASA-----AP 192

  Fly    57 LSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNN---SGEKGE 118
            .........|.:.|....|...|.:...|...|||...|:   |.:|.|:|:|..:   |..:|.
  Rat   193 AEPRYSQPATSTHSPPPDPLPCSAVAPSPGSDSHHGGKNS---LGNSSGASANAGSTHISSREGV 254

  Fly   119 EKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHH 183
            ......:||         :.|:|....|.:       .||.|       ||       |.|.:
  Rat   255 GTASAAEED---------APASSEQAGAQS-------EPSPA-------PP-------AQPQI-- 287

  Fly   184 AALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERA 248
                           :|..|::...:.|...|:.|:.||::||.|..||||.||..:||....|.
  Rat   288 ---------------YPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 337

  Fly   249 ALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAP 305
            .:|..|.:::.|:|.||||||.||::.            |:|. |:...|....|.|
  Rat   338 EIAHALCLSERQIKIWFQNRRMKWKKD------------NKLK-SMSMAAAGGAFRP 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	37/110 (34%)
		Homeodomain	218..274	CDD:459649	27/55 (49%)
Hoxa5	NP_077365.1	Homeodomain	307..363	CDD:459649	27/55 (49%)