DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hmx3a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:111 Identity:48/111 - (43%)
Similarity:64/111 - (57%) Gaps:11/111 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 NRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ 275
            ::.|.::||.||.|:|.||.:||..|..::||:|:|||.||..|.:|:.|||.||||||.||:||
Zfish   164 DKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 228

  Fly   276 TAEEREA---ERQAANRLML--------SLQAEAISKGFAPPSAPL 310
            .|.|.||   ...||.|::.        |......:.|..|.|.||
Zfish   229 LAAELEAANLSHAAAQRIVRVPILYHENSASESTNTAGNVPVSQPL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 48/111 (43%)
Homeodomain 218..274 CDD:459649 32/55 (58%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 1/7 (14%)
Blue background indicates that the domain is not in the aligned region.

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