DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hoxa4a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571610.1 Gene:hoxa4a / 58050 ZFINID:ZDB-GENE-000823-4 Length:245 Species:Danio rerio


Alignment Length:89 Identity:32/89 - (35%)
Similarity:48/89 - (53%) Gaps:10/89 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KDRLAAAFPIARRIGH------PYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAAL 250
            |.:....:|..::: |      .|....|   |:.||::||.|..||||.||..:||....|..:
Zfish   120 KSKEPVVYPWMKKV-HVNTVTASYSGGVP---KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEI 180

  Fly   251 ARGLKMTDAQVKTWFQNRRTKWRR 274
            |..:.:::.|||.||||||.||::
Zfish   181 AHTMCLSERQVKIWFQNRRMKWKK 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 31/85 (36%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
hoxa4aNP_571610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..99
Antp-type hexapeptide 126..131 1/4 (25%)
Homeodomain 148..204 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..245 32/89 (36%)
Blue background indicates that the domain is not in the aligned region.

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